Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.82■□□□□ 0.28
PDGFBP01127 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.82■□□□□ 0.28
PDGFBP01127 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFBP01127 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDGFBP01127 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFBP01127 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDGFBP01127 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 AC020907.1-201ENST00000616460 1350 ntBASIC16.81■□□□□ 0.28
PDGFBP01127 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFBP01127 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 AC099548.2-209ENST00000480264 625 ntBASIC16.81■□□□□ 0.28
PDGFBP01127 RNA5SP410-201ENST00000516285 106 ntBASIC16.81■□□□□ 0.28
PDGFBP01127 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDGFBP01127 CYP2A7P1-201ENST00000595391 815 ntBASIC16.81■□□□□ 0.28
PDGFBP01127 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.81■□□□□ 0.28
PDGFBP01127 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.81■□□□□ 0.28
PDGFBP01127 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFBP01127 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFBP01127 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDGFBP01127 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFBP01127 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFBP01127 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFBP01127 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDGFBP01127 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFBP01127 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PDGFBP01127 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 AC004461.2-201ENST00000629517 803 ntBASIC16.8■□□□□ 0.28
PDGFBP01127 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFBP01127 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFBP01127 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
PDGFBP01127 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDGFBP01127 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PDGFBP01127 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms