Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MBD3O95983 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MBD3O95983 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD3O95983 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
MBD3O95983 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD3O95983 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MBD3O95983 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 KRT18P22-201ENST00000402024 1347 ntBASIC19.45■□□□□ 0.7
MBD3O95983 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD3O95983 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD3O95983 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD3O95983 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD3O95983 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD3O95983 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.44■□□□□ 0.7
MBD3O95983 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MBD3O95983 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 TSPY15P-201ENST00000457163 923 ntBASIC19.44■□□□□ 0.7
MBD3O95983 AL359075.1-203ENST00000462729 1002 ntBASIC19.44■□□□□ 0.7
MBD3O95983 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
MBD3O95983 AL139011.1-202ENST00000642063 584 ntBASIC19.44■□□□□ 0.7
MBD3O95983 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MBD3O95983 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD3O95983 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MBD3O95983 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MBD3O95983 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MBD3O95983 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD3O95983 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD3O95983 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD3O95983 COX11P1-201ENST00000489116 835 ntBASIC19.43■□□□□ 0.7
MBD3O95983 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.43■□□□□ 0.7
MBD3O95983 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD3O95983 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD3O95983 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MBD3O95983 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MBD3O95983 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD3O95983 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD3O95983 Z83836.1-201ENST00000624605 1642 ntBASIC19.43■□□□□ 0.7
MBD3O95983 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD3O95983 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3O95983 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MBD3O95983 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MBD3O95983 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3O95983 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD3O95983 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms