Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.12■□□□□ 0.81
MBD4O95243 ADH5P3-201ENST00000433842 1137 ntBASIC20.12■□□□□ 0.81
MBD4O95243 AP006288.1-201ENST00000446065 395 ntBASIC20.12■□□□□ 0.81
MBD4O95243 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.12■□□□□ 0.81
MBD4O95243 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
MBD4O95243 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 AL596442.2-201ENST00000610240 980 ntBASIC20.12■□□□□ 0.81
MBD4O95243 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
MBD4O95243 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MBD4O95243 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD4O95243 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MBD4O95243 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
MBD4O95243 ACTG1P14-201ENST00000446382 1122 ntBASIC20.11■□□□□ 0.81
MBD4O95243 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MBD4O95243 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MBD4O95243 AP001160.2-201ENST00000596071 487 ntBASIC20.11■□□□□ 0.81
MBD4O95243 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.11■□□□□ 0.81
MBD4O95243 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
MBD4O95243 AC006277.1-201ENST00000624348 1610 ntBASIC20.11■□□□□ 0.81
MBD4O95243 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 AL671710.1-201ENST00000610245 2349 ntBASIC20.11■□□□□ 0.81
MBD4O95243 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
MBD4O95243 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD4O95243 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD4O95243 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD4O95243 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.1■□□□□ 0.81
MBD4O95243 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MBD4O95243 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.1■□□□□ 0.81
MBD4O95243 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 AL645728.1-201ENST00000366221 2101 ntBASIC20.1■□□□□ 0.81
MBD4O95243 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 AL355306.1-201ENST00000415580 579 ntBASIC20.1■□□□□ 0.81
MBD4O95243 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.1■□□□□ 0.81
MBD4O95243 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MBD4O95243 AC013467.2-201ENST00000605472 835 ntBASIC20.1■□□□□ 0.81
MBD4O95243 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.1■□□□□ 0.81
MBD4O95243 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD4O95243 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
MBD4O95243 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
MBD4O95243 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD4O95243 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 LINC00895-201ENST00000629028 1637 ntBASIC20.09■□□□□ 0.81
MBD4O95243 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MBD4O95243 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.09■□□□□ 0.81
MBD4O95243 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.09■□□□□ 0.81
MBD4O95243 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD4O95243 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MBD4O95243 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms