Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UBL3O95164 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 AC022188.1-201ENST00000620960 1664 ntBASIC15.24■□□□□ 0.03
UBL3O95164 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.24■□□□□ 0.03
UBL3O95164 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UBL3O95164 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBL3O95164 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UBL3O95164 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
UBL3O95164 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBL3O95164 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.24■□□□□ 0.03
UBL3O95164 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBL3O95164 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 AL356309.3-201ENST00000624132 1934 ntBASIC15.23■□□□□ 0.03
UBL3O95164 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 AKR1C7P-201ENST00000305623 895 ntBASIC15.23■□□□□ 0.03
UBL3O95164 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
UBL3O95164 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.23■□□□□ 0.03
UBL3O95164 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.23■□□□□ 0.03
UBL3O95164 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 MST1L-201ENST00000442552 2185 ntBASIC15.23■□□□□ 0.03
UBL3O95164 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 AL513477.1-201ENST00000602865 2407 ntBASIC15.23■□□□□ 0.03
UBL3O95164 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
UBL3O95164 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL3O95164 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL3O95164 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBL3O95164 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBL3O95164 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBL3O95164 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 FAAHP1-202ENST00000446499 1238 ntBASIC15.22■□□□□ 0.03
UBL3O95164 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.22■□□□□ 0.03
UBL3O95164 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL3O95164 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UBL3O95164 AL513523.2-202ENST00000427283 2040 ntBASIC15.22■□□□□ 0.03
UBL3O95164 AC092068.3-201ENST00000587894 2016 ntBASIC15.22■□□□□ 0.03
UBL3O95164 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
UBL3O95164 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL3O95164 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms