Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC22.1■■□□□ 1.13
LTN1O94822 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
LTN1O94822 AL589739.1-201ENST00000607720 493 ntBASIC22.1■■□□□ 1.13
LTN1O94822 AC007431.3-201ENST00000623221 587 ntBASIC22.1■■□□□ 1.13
LTN1O94822 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC22.1■■□□□ 1.13
LTN1O94822 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC22.09■■□□□ 1.13
LTN1O94822 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTN1O94822 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTN1O94822 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC22.09■■□□□ 1.13
LTN1O94822 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTN1O94822 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.09■■□□□ 1.13
LTN1O94822 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTN1O94822 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LTN1O94822 U91328.1-201ENST00000437528 223 ntBASIC22.09■■□□□ 1.13
LTN1O94822 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC22.09■■□□□ 1.13
LTN1O94822 NOP2-220ENST00000545915 630 ntTSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC22.09■■□□□ 1.13
LTN1O94822 PC-204ENST00000524491 1714 ntTSL 2 BASIC22.09■■□□□ 1.13
LTN1O94822 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LTN1O94822 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.08■■□□□ 1.13
LTN1O94822 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
LTN1O94822 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LTN1O94822 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
LTN1O94822 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LTN1O94822 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.08■■□□□ 1.13
LTN1O94822 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC22.08■■□□□ 1.13
LTN1O94822 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC22.08■■□□□ 1.13
LTN1O94822 SLC7A15P-201ENST00000424028 1363 ntBASIC22.08■■□□□ 1.13
LTN1O94822 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC22.08■■□□□ 1.13
LTN1O94822 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC22.08■■□□□ 1.13
LTN1O94822 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC22.08■■□□□ 1.13
LTN1O94822 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC22.08■■□□□ 1.13
LTN1O94822 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
LTN1O94822 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.08■■□□□ 1.13
LTN1O94822 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
LTN1O94822 AC068880.1-201ENST00000507289 2297 ntBASIC22.08■■□□□ 1.12
LTN1O94822 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LTN1O94822 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.08■■□□□ 1.12
LTN1O94822 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
LTN1O94822 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LTN1O94822 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LTN1O94822 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LTN1O94822 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
LTN1O94822 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.07■■□□□ 1.12
LTN1O94822 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.07■■□□□ 1.12
LTN1O94822 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 SSH2-210ENST00000582084 560 ntTSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.07■■□□□ 1.12
LTN1O94822 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.07■■□□□ 1.12
LTN1O94822 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
LTN1O94822 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LTN1O94822 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC22.07■■□□□ 1.12
LTN1O94822 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
LTN1O94822 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.07■■□□□ 1.12
LTN1O94822 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LTN1O94822 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
LTN1O94822 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC22.06■■□□□ 1.12
LTN1O94822 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LTN1O94822 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
LTN1O94822 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 AC079776.1-201ENST00000401540 1152 ntBASIC22.06■■□□□ 1.12
LTN1O94822 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
LTN1O94822 IGHV3-71-201ENST00000523324 359 ntBASIC22.06■■□□□ 1.12
LTN1O94822 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC22.06■■□□□ 1.12
LTN1O94822 CR383656.12-201ENST00000549567 513 ntBASIC22.06■■□□□ 1.12
LTN1O94822 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LTN1O94822 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms