Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 AP002414.1-201ENST00000391405 1147 ntBASIC17.18■□□□□ 0.34
USP1O94782 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.18■□□□□ 0.34
USP1O94782 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.18■□□□□ 0.34
USP1O94782 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 AC138894.3-201ENST00000603787 634 ntBASIC17.18■□□□□ 0.34
USP1O94782 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
USP1O94782 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 AL645728.1-201ENST00000366221 2101 ntBASIC17.18■□□□□ 0.34
USP1O94782 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.18■□□□□ 0.34
USP1O94782 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.17■□□□□ 0.34
USP1O94782 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP1O94782 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.17■□□□□ 0.34
USP1O94782 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.17■□□□□ 0.34
USP1O94782 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
USP1O94782 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP1O94782 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
USP1O94782 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.17■□□□□ 0.34
USP1O94782 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 PRYP5-201ENST00000451909 266 ntBASIC17.17■□□□□ 0.34
USP1O94782 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP1O94782 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.17■□□□□ 0.34
USP1O94782 CLEC4GP1-201ENST00000596555 870 ntBASIC17.17■□□□□ 0.34
USP1O94782 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.17■□□□□ 0.34
USP1O94782 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP1O94782 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
USP1O94782 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 AC092171.3-201ENST00000610122 2651 ntBASIC17.17■□□□□ 0.34
USP1O94782 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.17■□□□□ 0.34
USP1O94782 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP1O94782 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.16■□□□□ 0.34
USP1O94782 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP1O94782 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP1O94782 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.16■□□□□ 0.34
USP1O94782 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.16■□□□□ 0.34
USP1O94782 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.16■□□□□ 0.34
USP1O94782 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms