Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SLC43A1O75387 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC43A1O75387 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC43A1O75387 SCARNA2-201ENST00000458748 420 ntBASIC15.41■□□□□ 0.06
SLC43A1O75387 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.41■□□□□ 0.06
SLC43A1O75387 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.41■□□□□ 0.06
SLC43A1O75387 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC43A1O75387 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC43A1O75387 AL139288.1-201ENST00000623748 933 ntBASIC15.41■□□□□ 0.06
SLC43A1O75387 AC073592.4-201ENST00000623827 446 ntBASIC15.41■□□□□ 0.06
SLC43A1O75387 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC43A1O75387 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.41■□□□□ 0.06
SLC43A1O75387 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SLC43A1O75387 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SLC43A1O75387 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.41■□□□□ 0.06
SLC43A1O75387 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SLC43A1O75387 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.41■□□□□ 0.06
SLC43A1O75387 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SLC43A1O75387 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
SLC43A1O75387 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.4■□□□□ 0.06
SLC43A1O75387 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.4■□□□□ 0.06
SLC43A1O75387 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.4■□□□□ 0.06
SLC43A1O75387 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 AL691432.3-201ENST00000621860 400 ntBASIC15.4■□□□□ 0.06
SLC43A1O75387 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 AC007950.2-201ENST00000615045 2347 ntBASIC15.4■□□□□ 0.06
SLC43A1O75387 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SLC43A1O75387 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SLC43A1O75387 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SLC43A1O75387 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SLC43A1O75387 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
SLC43A1O75387 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SLC43A1O75387 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC43A1O75387 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC43A1O75387 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC43A1O75387 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.39■□□□□ 0.05
SLC43A1O75387 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC43A1O75387 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC43A1O75387 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC43A1O75387 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 AL450487.1-201ENST00000426799 995 ntBASIC15.39■□□□□ 0.05
SLC43A1O75387 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
SLC43A1O75387 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms