Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF11O60813 SNX33P1-201ENST00000592116 1762 ntBASIC17.12■□□□□ 0.33
PRAMEF11O60813 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 AC023274.1-201ENST00000418278 595 ntBASIC17.12■□□□□ 0.33
PRAMEF11O60813 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.12■□□□□ 0.33
PRAMEF11O60813 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 AL603756.1-201ENST00000606511 2163 ntBASIC17.12■□□□□ 0.33
PRAMEF11O60813 PCDHA12-202ENST00000613593 2588 ntBASIC17.12■□□□□ 0.33
PRAMEF11O60813 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF11O60813 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF11O60813 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.11■□□□□ 0.33
PRAMEF11O60813 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEF11O60813 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF11O60813 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.1■□□□□ 0.33
PRAMEF11O60813 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 AC002347.1-201ENST00000569543 541 ntBASIC17.1■□□□□ 0.33
PRAMEF11O60813 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF11O60813 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF11O60813 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF11O60813 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms