Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.18■□□□□ 0.18
LCMT2O60294 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LCMT2O60294 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 SLC22A20-204ENST00000530038 1673 ntBASIC16.18■□□□□ 0.18
LCMT2O60294 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 AL391256.1-201ENST00000443260 1855 ntBASIC16.17■□□□□ 0.18
LCMT2O60294 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LCMT2O60294 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.17■□□□□ 0.18
LCMT2O60294 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.17■□□□□ 0.18
LCMT2O60294 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.17■□□□□ 0.18
LCMT2O60294 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 MPDU1-223ENST00000582151 728 ntBASIC16.17■□□□□ 0.18
LCMT2O60294 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 AC064836.3-201ENST00000607928 673 ntBASIC16.17■□□□□ 0.18
LCMT2O60294 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.17■□□□□ 0.18
LCMT2O60294 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
LCMT2O60294 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.17■□□□□ 0.18
LCMT2O60294 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LCMT2O60294 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.17■□□□□ 0.18
LCMT2O60294 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 MIR574-201ENST00000385209 96 ntBASIC16.16■□□□□ 0.18
LCMT2O60294 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.16■□□□□ 0.18
LCMT2O60294 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 MIR4492-201ENST00000581627 80 ntBASIC16.16■□□□□ 0.18
LCMT2O60294 AC140113.2-201ENST00000604370 208 ntBASIC16.16■□□□□ 0.18
LCMT2O60294 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.16■□□□□ 0.18
LCMT2O60294 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LCMT2O60294 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCMT2O60294 AC006277.1-201ENST00000624348 1610 ntBASIC16.16■□□□□ 0.18
LCMT2O60294 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms