Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCA5O60264 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCA5O60264 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SMARCA5O60264 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.86■□□□□ 0.93
SMARCA5O60264 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 SLC25A1P1-201ENST00000528351 927 ntBASIC20.86■□□□□ 0.93
SMARCA5O60264 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 GGTLC5P-201ENST00000617623 998 ntBASIC20.86■□□□□ 0.93
SMARCA5O60264 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.86■□□□□ 0.93
SMARCA5O60264 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 SNX33P1-201ENST00000592116 1762 ntBASIC20.86■□□□□ 0.93
SMARCA5O60264 PCDH8P1-201ENST00000428983 2773 ntBASIC20.86■□□□□ 0.93
SMARCA5O60264 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCA5O60264 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SMARCA5O60264 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.86■□□□□ 0.93
SMARCA5O60264 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCA5O60264 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCA5O60264 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCA5O60264 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCA5O60264 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCA5O60264 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCA5O60264 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SMARCA5O60264 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCA5O60264 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 IL9RP2-201ENST00000423948 1312 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 AL662844.4-201ENST00000606367 2838 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCA5O60264 MRPL20P1-201ENST00000400819 433 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 AC093909.1-201ENST00000504731 1122 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCA5O60264 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 MIR4751-201ENST00000578027 74 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCA5O60264 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 PGM5P2-202ENST00000637225 1043 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMARCA5O60264 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 AC006277.1-201ENST00000624348 1610 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 LINC00895-201ENST00000629028 1637 ntBASIC20.85■□□□□ 0.93
SMARCA5O60264 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCA5O60264 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMARCA5O60264 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCA5O60264 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SMARCA5O60264 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCA5O60264 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.84■□□□□ 0.93
SMARCA5O60264 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.84■□□□□ 0.93
SMARCA5O60264 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCA5O60264 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.84■□□□□ 0.93
SMARCA5O60264 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SMARCA5O60264 MIR4492-201ENST00000581627 80 ntBASIC20.84■□□□□ 0.93
SMARCA5O60264 MPDU1-223ENST00000582151 728 ntBASIC20.84■□□□□ 0.93
SMARCA5O60264 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCA5O60264 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.84■□□□□ 0.93
SMARCA5O60264 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCA5O60264 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCA5O60264 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCA5O60264 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCA5O60264 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCA5O60264 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SMARCA5O60264 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCA5O60264 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMARCA5O60264 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.83■□□□□ 0.93
SMARCA5O60264 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms