Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX1O43812 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX1O43812 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX1O43812 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX1O43812 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.15■□□□□ 0.18
DUX1O43812 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX1O43812 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 SPCS2P1-201ENST00000561636 679 ntBASIC16.15■□□□□ 0.18
DUX1O43812 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX1O43812 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX1O43812 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.15■□□□□ 0.18
DUX1O43812 AC015911.4-201ENST00000588022 1070 ntBASIC16.15■□□□□ 0.18
DUX1O43812 AC021097.1-201ENST00000607902 574 ntBASIC16.15■□□□□ 0.18
DUX1O43812 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX1O43812 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
DUX1O43812 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.14■□□□□ 0.18
DUX1O43812 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
DUX1O43812 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.14■□□□□ 0.17
DUX1O43812 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.14■□□□□ 0.17
DUX1O43812 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.14■□□□□ 0.17
DUX1O43812 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
DUX1O43812 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.14■□□□□ 0.17
DUX1O43812 Z92544.3-201ENST00000624747 417 ntBASIC16.14■□□□□ 0.17
DUX1O43812 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.14■□□□□ 0.17
DUX1O43812 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DUX1O43812 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX1O43812 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX1O43812 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
DUX1O43812 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
DUX1O43812 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
DUX1O43812 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX1O43812 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX1O43812 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms