Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 AC098831.1-202ENST00000438821 336 ntBASIC15.09■□□□□ 0.01
TRAF3IP2O43734 AC108073.2-201ENST00000464002 357 ntBASIC15.09■□□□□ 0.01
TRAF3IP2O43734 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 AC107918.2-201ENST00000530817 355 ntBASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 LINC00895-201ENST00000629028 1637 ntBASIC15.09■□□□□ 0.01
TRAF3IP2O43734 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP2O43734 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.08■□□□□ 0
TRAF3IP2O43734 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.08■□□□□ 0
TRAF3IP2O43734 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.08■□□□□ 0
TRAF3IP2O43734 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAF3IP2O43734 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.08■□□□□ 0
TRAF3IP2O43734 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.08■□□□□ 0
TRAF3IP2O43734 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TRAF3IP2O43734 AC116407.3-201ENST00000623905 1129 ntBASIC15.08■□□□□ 0
TRAF3IP2O43734 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAF3IP2O43734 HLA-A-201ENST00000376802 1334 ntBASIC15.08■□□□□ 0
TRAF3IP2O43734 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRAF3IP2O43734 AL391256.1-201ENST00000443260 1855 ntBASIC15.08■□□□□ 0
TRAF3IP2O43734 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAF3IP2O43734 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.07■□□□□ 0
TRAF3IP2O43734 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.07■□□□□ 0
TRAF3IP2O43734 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.07■□□□□ 0
TRAF3IP2O43734 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAF3IP2O43734 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAF3IP2O43734 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms