Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMAD6O43541 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.04■□□□□ 0.32
SMAD6O43541 AL009183.1-201ENST00000603760 355 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SMAD6O43541 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD6O43541 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD6O43541 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD6O43541 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD6O43541 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMAD6O43541 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
SMAD6O43541 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 AC005915.1-201ENST00000624912 2018 ntBASIC17.03■□□□□ 0.32
SMAD6O43541 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.03■□□□□ 0.32
SMAD6O43541 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMAD6O43541 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SMAD6O43541 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.03■□□□□ 0.32
SMAD6O43541 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
SMAD6O43541 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.03■□□□□ 0.32
SMAD6O43541 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.03■□□□□ 0.32
SMAD6O43541 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.03■□□□□ 0.32
SMAD6O43541 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMAD6O43541 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMAD6O43541 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMAD6O43541 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
SMAD6O43541 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMAD6O43541 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SMAD6O43541 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SMAD6O43541 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 AC092183.1-201ENST00000469884 875 ntBASIC17.02■□□□□ 0.32
SMAD6O43541 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.02■□□□□ 0.32
SMAD6O43541 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SMAD6O43541 AL031055.1-201ENST00000606362 631 ntBASIC17.02■□□□□ 0.32
SMAD6O43541 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.02■□□□□ 0.32
SMAD6O43541 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.02■□□□□ 0.32
SMAD6O43541 AP001350.2-201ENST00000625104 1094 ntBASIC17.02■□□□□ 0.32
SMAD6O43541 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMAD6O43541 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD6O43541 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD6O43541 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD6O43541 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SMAD6O43541 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD6O43541 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMAD6O43541 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.02■□□□□ 0.31
SMAD6O43541 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.31
SMAD6O43541 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SMAD6O43541 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 AL355306.1-201ENST00000415580 579 ntBASIC17.01■□□□□ 0.31
SMAD6O43541 AC092474.2-201ENST00000424288 719 ntBASIC17.01■□□□□ 0.31
SMAD6O43541 AL671277.1-201ENST00000429656 993 ntBASIC17.01■□□□□ 0.31
SMAD6O43541 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.01■□□□□ 0.31
SMAD6O43541 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.01■□□□□ 0.31
SMAD6O43541 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.01■□□□□ 0.31
SMAD6O43541 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms