Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.89■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
C1QTNF3-AMACRE9PGA6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL592309.1-201ENST00000443127 649 ntBASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC079140.1-201ENST00000508039 487 ntBASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC004449.1-201ENST00000564240 433 ntBASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 WASH6P-202ENST00000359512 1437 ntBASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL627223.1-201ENST00000416693 442 ntBASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL645939.2-201ENST00000427340 991 ntBASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 IGHV3-62-201ENST00000520057 340 ntBASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 AC108860.2-201ENST00000562760 2183 ntBASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C1QTNF3-AMACRE9PGA6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms