Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AC018712.1-201ENST00000455767 687 ntBASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 UBALD1-205ENST00000590891 2641 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AC073621.1-201ENST00000392730 636 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 FAAHP1-202ENST00000446499 1238 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PAWRP1-201ENST00000451083 565 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AC012640.2-201ENST00000561606 901 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AL121894.2-201ENST00000602977 491 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AC008735.5-201ENST00000623544 497 ntBASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM6-TRIM34B2RNG4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM6-TRIM34B2RNG4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM6-TRIM34B2RNG4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRIM6-TRIM34B2RNG4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM6-TRIM34B2RNG4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
TRIM6-TRIM34B2RNG4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM6-TRIM34B2RNG4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRIM6-TRIM34B2RNG4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms