Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.58■□□□□ 0.41
SRRM3A6NNA2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 VENTXP7-201ENST00000475503 772 ntBASIC17.58■□□□□ 0.4
SRRM3A6NNA2 RFPL4AP1-201ENST00000530883 850 ntBASIC17.58■□□□□ 0.4
SRRM3A6NNA2 AC124947.2-201ENST00000547118 1133 ntBASIC17.58■□□□□ 0.4
SRRM3A6NNA2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 AL355877.3-201ENST00000622820 899 ntBASIC17.58■□□□□ 0.4
SRRM3A6NNA2 AC132872.4-202ENST00000622924 2756 ntBASIC17.58■□□□□ 0.4
SRRM3A6NNA2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SRRM3A6NNA2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 MTHFR-217ENST00000641820 1569 ntBASIC17.57■□□□□ 0.4
SRRM3A6NNA2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 METTL21AP1-201ENST00000438852 635 ntBASIC17.57■□□□□ 0.4
SRRM3A6NNA2 AL591424.1-201ENST00000442569 1213 ntBASIC17.57■□□□□ 0.4
SRRM3A6NNA2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 AP003733.1-201ENST00000491725 852 ntBASIC17.57■□□□□ 0.4
SRRM3A6NNA2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 AC008608.2-201ENST00000606089 416 ntBASIC17.57■□□□□ 0.4
SRRM3A6NNA2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SRRM3A6NNA2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SRRM3A6NNA2 MINOS1P3-201ENST00000457048 203 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms