Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC069262.1-201ENST00000539058 672 ntBASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 TUBB3P1-201ENST00000405796 1332 ntBASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 KRT8P49-201ENST00000604166 1432 ntBASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3BA6NDS4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 AC007613.1-201ENST00000572811 2597 ntBASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 GPS2P2-201ENST00000430745 888 ntBASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 RNA5SP421-201ENST00000516864 134 ntBASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3BA6NDS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 AC093214.1-201ENST00000511688 1107 ntBASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 MIR3909-201ENST00000579518 119 ntBASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms