Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC023274.1-201ENST00000418278 595 ntBASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 AC010327.4-202ENST00000591484 748 ntBASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 AL590787.1-201ENST00000568856 1315 ntBASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPDC1A2A3K4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 UBALD1-205ENST00000590891 2641 ntBASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 CRYGEP-201ENST00000412192 528 ntBASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PTPDC1A2A3K4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPDC1A2A3K4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTPDC1A2A3K4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 IGHV3-65-201ENST00000523210 341 ntBASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 AC008667.4-201ENST00000607370 168 ntBASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPDC1A2A3K4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 YBX2P1-201ENST00000394192 760 ntBASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 KRT18P2-201ENST00000447938 1258 ntBASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms