Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AP002414.3-201ENST00000589352 1468 ntBASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MED15P5-201ENST00000423150 992 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PRYP5-201ENST00000451909 266 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SIGLEC30P-201ENST00000455569 941 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC145285.3-201ENST00000564603 959 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC109462.3-201ENST00000573934 613 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 Z83851.2-201ENST00000609564 659 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 AC006538.3-201ENST00000612495 578 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PGM5P2-202ENST00000637225 1043 ntBASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRBV4S1A1TA0A5B7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.23
TCRBV4S1A1TA0A5B7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.65□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SIGLEC16-201ENST00000599858 1437 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC003669.1-201ENST00000334569 611 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.64□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms