Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 AC079776.2-201ENST00000641154 1609 ntBASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 POM121L3P-201ENST00000419331 1163 ntBASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 PCED1CP-201ENST00000419887 785 ntBASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ABCD1P5-201ENST00000445663 754 ntBASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV9S1A1TA0A576 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 AC243591.1-201ENST00000452967 1364 ntBASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 MIR3180-1-201ENST00000580374 94 ntBASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 MIR3180-3-201ENST00000584616 94 ntBASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 AC092329.2-201ENST00000598402 547 ntBASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 AC006277.1-201ENST00000624348 1610 ntBASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms