Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 LINC02199-201ENST00000506655 2702 ntBASIC19.32■□□□□ 0.68
CLIC4Q9Y696 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 CLEC4GP1-201ENST00000596555 870 ntBASIC19.32■□□□□ 0.68
CLIC4Q9Y696 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 SNX33P1-201ENST00000592116 1762 ntBASIC19.32■□□□□ 0.68
CLIC4Q9Y696 AC006538.1-201ENST00000567905 1585 ntBASIC19.32■□□□□ 0.68
CLIC4Q9Y696 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 SAPCD2P3-201ENST00000455031 850 ntBASIC19.31■□□□□ 0.68
CLIC4Q9Y696 UNC93B7-201ENST00000509439 705 ntBASIC19.31■□□□□ 0.68
CLIC4Q9Y696 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 AC013467.2-201ENST00000605472 835 ntBASIC19.31■□□□□ 0.68
CLIC4Q9Y696 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLIC4Q9Y696 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 ELK2BP-201ENST00000415014 1224 ntBASIC19.3■□□□□ 0.68
CLIC4Q9Y696 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms