Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 AC018845.2-201ENST00000568326 409 ntBASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 AC092068.3-201ENST00000587894 2016 ntBASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL4A3BPQ9Y5P4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC105020.1-201ENST00000435356 2205 ntBASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC005915.1-201ENST00000624912 2018 ntBASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 YBX2P1-201ENST00000394192 760 ntBASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC004832.2-201ENST00000426397 482 ntBASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AC084018.2-201ENST00000613093 2607 ntBASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL4A3BPQ9Y5P4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 AC139530.3-201ENST00000620344 690 ntBASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 AC010507.1-201ENST00000633895 436 ntBASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
COL4A3BPQ9Y5P4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 MIR1233-2-201ENST00000408138 82 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms