Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHA3Q9Y5H8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA3Q9Y5H8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHA3Q9Y5H8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 NCF1C-201ENST00000438382 1427 ntBASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHA3Q9Y5H8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AC138894.3-201ENST00000603787 634 ntBASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AC091076.1-201ENST00000610741 619 ntBASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AL022326.1-202ENST00000641533 845 ntBASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHA3Q9Y5H8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 OR6D1P-203ENST00000641209 4860 ntBASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHA3Q9Y5H8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms