Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB2Q9Y5E7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 AL121761.2-201ENST00000598007 1648 ntBASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 AP000344.2-201ENST00000512987 629 ntBASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 EGFEM1P-202ENST00000431685 1563 ntBASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB2Q9Y5E7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 MIR4515-201ENST00000584082 81 ntBASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AC027612.4-201ENST00000605371 583 ntBASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AL513210.1-201ENST00000629608 234 ntBASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AC105339.1-204ENST00000636249 355 ntBASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 AC022211.2-201ENST00000585075 2527 ntBASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB2Q9Y5E7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms