Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 AC069262.1-201ENST00000539058 672 ntBASIC18.29■□□□□ 0.52
USP15Q9Y4E8 AC190387.1-201ENST00000551683 408 ntBASIC18.29■□□□□ 0.52
USP15Q9Y4E8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 AL121761.2-201ENST00000598007 1648 ntBASIC18.29■□□□□ 0.52
USP15Q9Y4E8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP15Q9Y4E8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 AC068137.2-201ENST00000605408 478 ntBASIC18.28■□□□□ 0.52
USP15Q9Y4E8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 REXO1L3P-201ENST00000622202 1288 ntBASIC18.28■□□□□ 0.52
USP15Q9Y4E8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP15Q9Y4E8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 AF228730.6-201ENST00000641497 218 ntBASIC18.27■□□□□ 0.52
USP15Q9Y4E8 AC084121.3-201ENST00000641716 218 ntBASIC18.27■□□□□ 0.52
USP15Q9Y4E8 AC105233.6-201ENST00000642093 218 ntBASIC18.27■□□□□ 0.52
USP15Q9Y4E8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP15Q9Y4E8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP15Q9Y4E8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP15Q9Y4E8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms