Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SHANK2Q9UPX8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 RN7SL692P-201ENST00000464677 288 ntBASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 AC003101.2-201ENST00000612557 442 ntBASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC24.83■■□□□ 1.56
SHANK2Q9UPX8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 PCDHB17P-201ENST00000539533 2393 ntBASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 HNRNPA3P5-201ENST00000455201 833 ntBASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 AC027307.3-201ENST00000594262 1100 ntBASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 AC004790.1-201ENST00000612686 536 ntBASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHANK2Q9UPX8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 CETN4P-206ENST00000642099 2168 ntBASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 AC098859.1-201ENST00000502915 1238 ntBASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 AC008738.7-201ENST00000609744 511 ntBASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SHANK2Q9UPX8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 PC-204ENST00000524491 1714 ntTSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 GGT4P-201ENST00000623672 1708 ntBASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 AC092068.3-201ENST00000587894 2016 ntBASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 AC004840.1-201ENST00000636359 365 ntBASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHANK2Q9UPX8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 RNA5SP410-201ENST00000516285 106 ntBASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 AC061975.2-201ENST00000581722 295 ntBASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC24.79■■□□□ 1.56
SHANK2Q9UPX8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms