Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 AC096734.2-201ENST00000562054 433 ntBASIC16.65■□□□□ 0.26
SATB2Q9UPW6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 AC109462.3-201ENST00000573934 613 ntBASIC16.65■□□□□ 0.26
SATB2Q9UPW6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 AC116407.2-201ENST00000613639 860 ntBASIC16.65■□□□□ 0.26
SATB2Q9UPW6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
SATB2Q9UPW6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SATB2Q9UPW6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.64■□□□□ 0.26
SATB2Q9UPW6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SATB2Q9UPW6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.64■□□□□ 0.26
SATB2Q9UPW6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SATB2Q9UPW6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SATB2Q9UPW6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC100803.2-201ENST00000562459 1963 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PTCHD3P3-201ENST00000403073 906 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 TSEN15P1-201ENST00000423257 515 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 STK19B-204ENST00000512515 211 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC019129.2-201ENST00000609837 1235 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC093028.1-201ENST00000622998 982 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC012317.2-201ENST00000623305 2251 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC097637.2-201ENST00000624096 1997 ntBASIC16.64■□□□□ 0.25
SATB2Q9UPW6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SATB2Q9UPW6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 AC063926.3-201ENST00000624734 5658 ntBASIC16.63■□□□□ 0.25
SATB2Q9UPW6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 LINC00896-202ENST00000609602 2128 ntBASIC16.63■□□□□ 0.25
SATB2Q9UPW6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SATB2Q9UPW6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms