Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 AC105233.2-201ENST00000523697 349 ntBASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 AF228730.5-201ENST00000530288 346 ntBASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.51■□□□□ 0.55
GTF2IRD1Q9UHL9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 LETM1P2-201ENST00000597330 2178 ntBASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 AC073389.1-201ENST00000595595 795 ntBASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GTF2IRD1Q9UHL9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC241585.1-201ENST00000433527 519 ntBASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC004890.2-204ENST00000481968 304 ntBASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 RARRES2P9-201ENST00000565168 469 ntBASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC018529.1-201ENST00000613063 361 ntBASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.49■□□□□ 0.55
GTF2IRD1Q9UHL9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 AC005034.1-201ENST00000426657 489 ntBASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 KRT18P34-201ENST00000488218 1270 ntBASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.48■□□□□ 0.55
GTF2IRD1Q9UHL9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms