Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPASTQ9UBP0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 PP12613-201ENST00000424958 2230 ntBASIC16.89■□□□□ 0.29
SPASTQ9UBP0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AL645608.8-201ENST00000606034 2086 ntBASIC16.89■□□□□ 0.29
SPASTQ9UBP0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AL078644.1-201ENST00000609881 752 ntBASIC16.89■□□□□ 0.29
SPASTQ9UBP0 AL596442.2-201ENST00000610240 980 ntBASIC16.89■□□□□ 0.29
SPASTQ9UBP0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPASTQ9UBP0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 AC254562.1-201ENST00000417586 456 ntBASIC16.88■□□□□ 0.29
SPASTQ9UBP0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 CXCL1P1-201ENST00000502804 216 ntBASIC16.88■□□□□ 0.29
SPASTQ9UBP0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPASTQ9UBP0 AC025580.3-201ENST00000617932 1424 ntBASIC16.87■□□□□ 0.29
SPASTQ9UBP0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 LINC00304-203ENST00000565008 1864 ntBASIC16.87■□□□□ 0.29
SPASTQ9UBP0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 CEND1P1-201ENST00000451006 455 ntBASIC16.87■□□□□ 0.29
SPASTQ9UBP0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 AC074386.1-202ENST00000463561 864 ntBASIC16.87■□□□□ 0.29
SPASTQ9UBP0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPASTQ9UBP0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms