Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 PAWRP1-201ENST00000451083 565 ntBASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AC117500.6-201ENST00000624871 588 ntBASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AF228730.7-201ENST00000641842 219 ntBASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AC008894.3-201ENST00000624324 3103 ntBASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 AC098831.1-202ENST00000438821 336 ntBASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 IGHV3-65-201ENST00000523210 341 ntBASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 GGTLC5P-201ENST00000617623 998 ntBASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PPARGC1AQ9UBK2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AC079776.4-201ENST00000511039 504 ntBASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AC124947.2-201ENST00000547118 1133 ntBASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 BX640515.1-201ENST00000617215 977 ntBASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PPARGC1AQ9UBK2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PPARGC1AQ9UBK2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms