Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MIR661-201ENST00000384842 89 ntBASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 MIR3909-201ENST00000579518 119 ntBASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 MPDU1-223ENST00000582151 728 ntBASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 AC131009.4-201ENST00000624048 1740 ntBASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AC236430.1-201ENST00000402231 743 ntBASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 TSPY16P-201ENST00000449843 468 ntBASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 RN7SL204P-201ENST00000582831 262 ntBASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AP001350.2-201ENST00000625104 1094 ntBASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AC016027.1-202ENST00000607927 1699 ntBASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DNMT3BQ9UBC3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 AC002472.2-201ENST00000442739 958 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 IGHV3-42-201ENST00000520410 361 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 AL138918.1-201ENST00000568306 659 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 MIR6080-201ENST00000617359 66 ntBASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DNMT3BQ9UBC3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3BQ9UBC3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
DNMT3BQ9UBC3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3BQ9UBC3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
DNMT3BQ9UBC3 AC116353.5-201ENST00000638148 1699 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms