Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRIT1Q9P2V4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 KRT18P32-201ENST00000424695 1287 ntBASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 IGHV3-62-201ENST00000520057 340 ntBASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 AC087641.1-201ENST00000557561 1021 ntBASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 AL021920.2-201ENST00000624828 1351 ntBASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRIT1Q9P2V4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 SPCS2P4-201ENST00000436160 681 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AC069335.1-201ENST00000489972 472 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 MIR3197-201ENST00000582241 73 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AC092364.2-202ENST00000597012 1073 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 LETM1P2-201ENST00000597330 2178 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 AC131009.4-201ENST00000624048 1740 ntBASIC16.31■□□□□ 0.2
LRIT1Q9P2V4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 RNU1-129P-201ENST00000384064 167 ntBASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 FAM58DP-201ENST00000428076 619 ntBASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 U1.21-201ENST00000580816 167 ntBASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AL031055.1-201ENST00000606362 631 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms