Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 AL596442.2-201ENST00000610240 980 ntBASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMG20BQ9P0W2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMG20BQ9P0W2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 AC140658.5-201ENST00000438532 169 ntBASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 AL353732.1-201ENST00000569618 1459 ntBASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMG20BQ9P0W2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 ACTG1P14-201ENST00000446382 1122 ntBASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 AC079781.4-201ENST00000641908 219 ntBASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMG20BQ9P0W2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC009053.2-201ENST00000563701 2365 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 AC012569.1-201ENST00000591191 1524 ntBASIC20.53■□□□□ 0.88
HMG20BQ9P0W2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms