Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 AC006277.1-201ENST00000624348 1610 ntBASIC18.05■□□□□ 0.48
CISHQ9NSE2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 AL353732.1-201ENST00000569618 1459 ntBASIC18.04■□□□□ 0.48
CISHQ9NSE2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 AC007967.2-201ENST00000432613 625 ntBASIC18.04■□□□□ 0.48
CISHQ9NSE2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.04■□□□□ 0.48
CISHQ9NSE2 AC005412.3-201ENST00000580309 715 ntBASIC18.04■□□□□ 0.48
CISHQ9NSE2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CISHQ9NSE2 FLJ38576-201ENST00000623820 2459 ntBASIC18.04■□□□□ 0.48
CISHQ9NSE2 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MIR4492-201ENST00000581627 80 ntBASIC18.03■□□□□ 0.48
CISHQ9NSE2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 AC013467.2-201ENST00000605472 835 ntBASIC18.03■□□□□ 0.48
CISHQ9NSE2 AC064836.3-201ENST00000607928 673 ntBASIC18.03■□□□□ 0.48
CISHQ9NSE2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 AC131009.4-201ENST00000624048 1740 ntBASIC18.03■□□□□ 0.48
CISHQ9NSE2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.03■□□□□ 0.48
CISHQ9NSE2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CISHQ9NSE2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AL022342.1-201ENST00000400363 863 ntBASIC18.02■□□□□ 0.48
CISHQ9NSE2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CISHQ9NSE2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AL603756.1-201ENST00000606511 2163 ntBASIC18.02■□□□□ 0.48
CISHQ9NSE2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.02■□□□□ 0.48
CISHQ9NSE2 AC010507.1-201ENST00000633895 436 ntBASIC18.02■□□□□ 0.48
CISHQ9NSE2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms