Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 MIR4515-201ENST00000584082 81 ntBASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
PDLIM7Q9NR12 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 PIN1P1-201ENST00000412108 996 ntBASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 MRPS18AP1-201ENST00000414458 589 ntBASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 RN7SL692P-201ENST00000464677 288 ntBASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 AC004890.2-204ENST00000481968 304 ntBASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM7Q9NR12 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 AC020763.4-201ENST00000623414 4170 ntBASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM7Q9NR12 TOP3BP1-201ENST00000420768 1380 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms