Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 RPSAP43-201ENST00000402237 625 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 MCCD1P2-201ENST00000423228 335 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 AL513480.1-201ENST00000451731 511 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 AC025580.3-201ENST00000617932 1424 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF304Q9HCX3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 GPX1P2-201ENST00000429271 606 ntBASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AC112482.1-201ENST00000492080 688 ntBASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 KRT19P2-202ENST00000557173 1012 ntBASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 PDPK2P-202ENST00000562415 1191 ntBASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AC139530.3-201ENST00000620344 690 ntBASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF304Q9HCX3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ZNF304Q9HCX3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF304Q9HCX3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms