Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AL645608.8-201ENST00000606034 2086 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AC073621.1-201ENST00000392730 636 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AC098831.1-202ENST00000438821 336 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 GGTLC5P-201ENST00000617623 998 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AC116407.3-201ENST00000623905 1129 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 AC243591.1-201ENST00000452967 1364 ntBASIC14.85□□□□□ -0.03
CDH20Q9HBT6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH20Q9HBT6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.84□□□□□ -0.03
CDH20Q9HBT6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.84□□□□□ -0.03
CDH20Q9HBT6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 AC117500.6-201ENST00000624871 588 ntBASIC14.84□□□□□ -0.03
CDH20Q9HBT6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH20Q9HBT6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH20Q9HBT6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH20Q9HBT6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms