Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC106886.4-201ENST00000623557 2502 ntBASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC105020.1-201ENST00000435356 2205 ntBASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC106795.1-205ENST00000512851 1056 ntBASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC091304.2-201ENST00000564639 760 ntBASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 LINC00982-205ENST00000420957 435 ntBASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 KRT18P31-201ENST00000506277 1292 ntBASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 AL139288.1-201ENST00000623748 933 ntBASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 AC008894.3-201ENST00000624324 3103 ntBASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC68Q9H2F9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 FRMD8P1-201ENST00000440433 1524 ntBASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 BX005266.1-201ENST00000473402 457 ntBASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 MTDHP3-201ENST00000594186 672 ntBASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 AL022326.1-202ENST00000641533 845 ntBASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC68Q9H2F9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms