Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 AC105917.1-201ENST00000506637 2539 ntBASIC17.09■□□□□ 0.33
VPS11Q9H270 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 AC003669.1-201ENST00000334569 611 ntBASIC17.09■□□□□ 0.33
VPS11Q9H270 KLF4P1-201ENST00000412782 1185 ntBASIC17.09■□□□□ 0.33
VPS11Q9H270 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 VENTXP7-201ENST00000475503 772 ntBASIC17.09■□□□□ 0.33
VPS11Q9H270 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 RN7SL850P-201ENST00000579959 291 ntBASIC17.09■□□□□ 0.33
VPS11Q9H270 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VPS11Q9H270 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
VPS11Q9H270 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
VPS11Q9H270 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS11Q9H270 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
VPS11Q9H270 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
VPS11Q9H270 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
VPS11Q9H270 AC092364.2-201ENST00000596710 2692 ntBASIC17.08■□□□□ 0.33
VPS11Q9H270 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
VPS11Q9H270 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS11Q9H270 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.08■□□□□ 0.33
VPS11Q9H270 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS11Q9H270 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS11Q9H270 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
VPS11Q9H270 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
VPS11Q9H270 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS11Q9H270 AC246785.2-201ENST00000432512 513 ntBASIC17.08■□□□□ 0.32
VPS11Q9H270 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VPS11Q9H270 AL136038.3-201ENST00000561909 1096 ntBASIC17.08■□□□□ 0.32
VPS11Q9H270 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.08■□□□□ 0.32
VPS11Q9H270 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.08■□□□□ 0.32
VPS11Q9H270 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS11Q9H270 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VPS11Q9H270 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VPS11Q9H270 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VPS11Q9H270 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VPS11Q9H270 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS11Q9H270 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.07■□□□□ 0.32
VPS11Q9H270 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.07■□□□□ 0.32
VPS11Q9H270 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS11Q9H270 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.07■□□□□ 0.32
VPS11Q9H270 AC073592.5-201ENST00000624854 528 ntBASIC17.07■□□□□ 0.32
VPS11Q9H270 AL365203.3-201ENST00000609742 2057 ntBASIC17.07■□□□□ 0.32
VPS11Q9H270 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms