Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 FARP1-224ENST00000598389 747 ntTSL 58.08□□□□□ -1.125e-6■■□□□ 12.9
XRN2Q9H0D6 NEU4-216ENST00000494678 491 ntTSL 423.06■■□□□ 1.284e-6■■□□□ 12.9
XRN2Q9H0D6 NEU4-213ENST00000435934 451 ntTSL 420.24■□□□□ 0.834e-6■■□□□ 12.9
XRN2Q9H0D6 DENND4B-213ENST00000531748 544 ntTSL 423.78■■□□□ 1.43e-10■■□□□ 12.9
XRN2Q9H0D6 LRCH4-204ENST00000476881 1675 ntTSL 223.01■■□□□ 1.273e-10■■□□□ 12.9
XRN2Q9H0D6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.49■■□□□ 1.033e-10■■□□□ 12.9
XRN2Q9H0D6 GUK1-239ENST00000498115 796 ntTSL 521.07■□□□□ 0.963e-10■■□□□ 12.9
XRN2Q9H0D6 GUK1-222ENST00000477206 589 ntTSL 220.57■□□□□ 0.883e-10■■□□□ 12.9
XRN2Q9H0D6 NUDT4-207ENST00000550056 531 ntTSL 418.65■□□□□ 0.583e-10■■□□□ 12.9
XRN2Q9H0D6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.53e-10■■□□□ 12.9
XRN2Q9H0D6 GUK1-217ENST00000465025 783 ntTSL 217.6■□□□□ 0.413e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.28■□□□□ 0.363e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.72■□□□□ 0.273e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.31■□□□□ 0.23e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.183e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.113e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.4■□□□□ 0.063e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.4■□□□□ 0.063e-10■■□□□ 12.9
XRN2Q9H0D6 DENND4B-208ENST00000480340 2530 ntTSL 215.13■□□□□ 0.013e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.04■□□□□ -03e-10■■□□□ 12.9
XRN2Q9H0D6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.013e-10■■□□□ 12.9
XRN2Q9H0D6 LRCH4-202ENST00000467201 4754 ntTSL 214.96□□□□□ -0.013e-10■■□□□ 12.9
XRN2Q9H0D6 NUDT4-203ENST00000546925 569 ntTSL 414.54□□□□□ -0.083e-10■■□□□ 12.9
XRN2Q9H0D6 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.34e-6■■□□□ 12.9
XRN2Q9H0D6 DENND4B-202ENST00000368646 3781 ntAPPRIS ALT2 TSL 512.4□□□□□ -0.433e-10■■□□□ 12.9
XRN2Q9H0D6 NUDT4-204ENST00000547014 1419 ntTSL 2 BASIC11.5□□□□□ -0.573e-10■■□□□ 12.9
XRN2Q9H0D6 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC10.95□□□□□ -0.663e-10■■□□□ 12.9
XRN2Q9H0D6 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.05□□□□□ -1.123e-10■■□□□ 12.9
XRN2Q9H0D6 EPS8L2-206ENST00000526380 545 ntTSL 318.74■□□□□ 0.599e-8■■□□□ 12.9
XRN2Q9H0D6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.158e-8■■□□□ 12.9
XRN2Q9H0D6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.252e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.22e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-209ENST00000548084 542 ntTSL 314.52□□□□□ -0.092e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-213ENST00000549855 711 ntTSL 512.72□□□□□ -0.372e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-215ENST00000550920 752 ntTSL 512.39□□□□□ -0.432e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.462e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-212ENST00000549259 690 ntTSL 512.08□□□□□ -0.482e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.572e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-220ENST00000552055 521 ntTSL 510.68□□□□□ -0.72e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-208ENST00000547914 543 ntTSL 59.42□□□□□ -0.92e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-218ENST00000551775 449 ntTSL 59.42□□□□□ -0.92e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-219ENST00000551793 768 ntTSL 27.82□□□□□ -1.162e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.8□□□□□ -1.162e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.3□□□□□ -1.242e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-217ENST00000551520 544 ntTSL 27.23□□□□□ -1.252e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-206ENST00000546862 492 ntTSL 35.75□□□□□ -1.492e-7■■□□□ 12.9
XRN2Q9H0D6 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.732e-7■■□□□ 12.9
XRN2Q9H0D6 SLC9A3R1-205ENST00000583369 841 ntTSL 327.51■■□□□ 1.992e-6■■□□□ 12.9
XRN2Q9H0D6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.172e-6■■□□□ 12.9
XRN2Q9H0D6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.971e-8■■□□□ 12.9
XRN2Q9H0D6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.61■□□□□ 0.891e-8■■□□□ 12.9
XRN2Q9H0D6 RBM14-RBM4-202ENST00000421355 2034 ntTSL 219.2■□□□□ 0.661e-8■■□□□ 12.9
XRN2Q9H0D6 RBM14-RBM4-204ENST00000511114 523 ntTSL 414.49□□□□□ -0.091e-8■■□□□ 12.9
XRN2Q9H0D6 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.34□□□□□ -1.077e-7■■□□□ 12.9
XRN2Q9H0D6 ARAP1-221ENST00000546293 702 ntTSL 320.2■□□□□ 0.821e-7■■□□□ 12.9
XRN2Q9H0D6 SLC2A8-207ENST00000430147 1030 ntTSL 320.01■□□□□ 0.792e-9■■□□□ 12.9
XRN2Q9H0D6 ARL6IP6-205ENST00000495469 1308 ntTSL 225.01■■□□□ 1.595e-14■■□□□ 12.9
XRN2Q9H0D6 TF-202ENST00000414694 546 ntTSL 421.75■■□□□ 1.075e-14■■□□□ 12.9
XRN2Q9H0D6 TF-203ENST00000460531 577 ntTSL 421.75■■□□□ 1.075e-14■■□□□ 12.9
XRN2Q9H0D6 TF-208ENST00000474287 645 ntTSL 220.93■□□□□ 0.945e-14■■□□□ 12.9
XRN2Q9H0D6 TKT-213ENST00000487660 610 ntTSL 219.56■□□□□ 0.725e-14■■□□□ 12.9
XRN2Q9H0D6 TF-206ENST00000466911 526 ntTSL 418.95■□□□□ 0.625e-14■■□□□ 12.9
XRN2Q9H0D6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.8■□□□□ 0.445e-14■■□□□ 12.9
XRN2Q9H0D6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.375e-14■■□□□ 12.9
XRN2Q9H0D6 TKT-206ENST00000460343 7286 ntTSL 211.69□□□□□ -0.545e-14■■□□□ 12.9
XRN2Q9H0D6 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.945e-14■■□□□ 12.9
XRN2Q9H0D6 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.72□□□□□ -1.015e-14■■□□□ 12.9
XRN2Q9H0D6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.59■■□□□ 1.532e-7■■□□□ 12.9
XRN2Q9H0D6 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)19.21■□□□□ 0.672e-7■■□□□ 12.9
XRN2Q9H0D6 SHMT2-220ENST00000555634 964 ntTSL 512.46□□□□□ -0.414e-7■■□□□ 12.9
XRN2Q9H0D6 PQLC1-213ENST00000591964 856 ntTSL 330.43■■■□□ 2.462e-6■■□□□ 12.9
XRN2Q9H0D6 CTDSP1-209ENST00000488627 1118 ntTSL 318.78■□□□□ 0.61e-6■■□□□ 12.9
XRN2Q9H0D6 CTDSP1-202ENST00000428361 842 ntTSL 518.62■□□□□ 0.571e-6■■□□□ 12.9
XRN2Q9H0D6 CTDSP1-208ENST00000482272 984 ntTSL 216.2■□□□□ 0.181e-6■■□□□ 12.9
XRN2Q9H0D6 CTDSP1-206ENST00000464255 926 ntTSL 515.68■□□□□ 0.11e-6■■□□□ 12.9
XRN2Q9H0D6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.152e-6■■□□□ 12.8
XRN2Q9H0D6 EFNA1-204ENST00000474413 1083 ntTSL 321.21■□□□□ 0.992e-6■■□□□ 12.8
XRN2Q9H0D6 EFNA1-203ENST00000469878 1288 ntTSL 316.34■□□□□ 0.212e-6■■□□□ 12.8
XRN2Q9H0D6 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC14.54□□□□□ -0.082e-6■■□□□ 12.8
XRN2Q9H0D6 PTOV1-203ENST00000594165 986 ntTSL 322.14■■□□□ 1.133e-6■■□□□ 12.8
XRN2Q9H0D6 PTBP1-218ENST00000592804 742 ntTSL 222.69■■□□□ 1.221e-9■■□□□ 12.8
XRN2Q9H0D6 NOTUM-204ENST00000489218 972 ntTSL 222.5■■□□□ 1.195e-24■■□□□ 12.8
XRN2Q9H0D6 MIR6515-201ENST00000619843 57 ntBASIC1.62□□□□□ -2.151e-6■■□□□ 12.8
XRN2Q9H0D6 AARS-202ENST00000564359 590 ntTSL 312.11□□□□□ -0.471e-13■■□□□ 12.8
XRN2Q9H0D6 PABPN1-206ENST00000556809 969 ntTSL 226.41■■□□□ 1.825e-38■■□□□ 12.8
XRN2Q9H0D6 MARS-230ENST00000552914 734 ntTSL 37.2□□□□□ -1.269e-7■■□□□ 12.8
XRN2Q9H0D6 RRBP1-209ENST00000495501 832 ntTSL 524.06■■□□□ 1.441e-6■■□□□ 12.8
XRN2Q9H0D6 TRNP1-202ENST00000531285 575 ntAPPRIS ALT2 TSL 226.35■■□□□ 1.811e-6■■□□□ 12.8
XRN2Q9H0D6 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC13.68□□□□□ -0.224e-6■■□□□ 12.8
XRN2Q9H0D6 DDX3X-214ENST00000622373 2129 nt21.16■□□□□ 0.988e-8■■□□□ 12.8
XRN2Q9H0D6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.94□□□□□ -0.181e-14■■□□□ 12.8
XRN2Q9H0D6 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC11.78□□□□□ -0.522e-6■■□□□ 12.8
XRN2Q9H0D6 GPT2-203ENST00000562132 554 ntTSL 417.76■□□□□ 0.431e-6■■□□□ 12.8
XRN2Q9H0D6 RBM12-204ENST00000424458 1068 ntTSL 229.51■■■□□ 2.311e-8■■□□□ 12.8
XRN2Q9H0D6 CPNE1-223ENST00000475146 627 ntTSL 328.34■■■□□ 2.131e-8■■□□□ 12.8
XRN2Q9H0D6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.11e-8■■□□□ 12.8
XRN2Q9H0D6 RBM12-206ENST00000435161 565 ntTSL 413.45□□□□□ -0.261e-8■■□□□ 12.8
XRN2Q9H0D6 RBM12-205ENST00000431148 583 ntTSL 413.18□□□□□ -0.31e-8■■□□□ 12.8
XRN2Q9H0D6 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.491e-8■■□□□ 12.8
XRN2Q9H0D6 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.951e-8■■□□□ 12.8
Retrieved 100 of 21,068 protein–RNA pairs in 121.3 ms