Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
UBE2OQ9C0C9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 MYCLP1-201ENST00000372451 1075 ntBASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
UBE2OQ9C0C9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AC079776.1-201ENST00000401540 1152 ntBASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AL353779.1-201ENST00000434793 351 ntBASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBE2OQ9C0C9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 AL512384.1-201ENST00000406683 331 ntBASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 RN7SL752P-201ENST00000463779 287 ntBASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 RAB43P1-201ENST00000561790 589 ntBASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2OQ9C0C9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2OQ9C0C9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.58■□□□□ 0.57
UBE2OQ9C0C9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms