Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRNKL1Q9BZJ0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.08■□□□□ 0.8
CRNKL1Q9BZJ0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRNKL1Q9BZJ0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRNKL1Q9BZJ0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 AC004461.1-201ENST00000412461 403 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 PMS2P4-201ENST00000412466 1052 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 TIMM8BP1-201ENST00000452384 211 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 RARRES2P8-201ENST00000566335 367 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 AC004835.2-201ENST00000603762 682 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 PKD1P1-201ENST00000458669 6805 ntBASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.07■□□□□ 0.8
CRNKL1Q9BZJ0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 AC092474.2-201ENST00000424288 719 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SPDYE11-202ENST00000450699 704 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SPDYE9P-201ENST00000570642 692 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SPDYE10P-202ENST00000612005 668 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SPDYE8P-202ENST00000612377 668 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 AL645608.8-201ENST00000606034 2086 ntBASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.06■□□□□ 0.8
CRNKL1Q9BZJ0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AKAP8P1-201ENST00000434743 1349 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 KRT18P28-201ENST00000453838 1332 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 TFAMP1-201ENST00000412727 736 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 RN7SL589P-201ENST00000481268 310 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 KRT8P48-201ENST00000515599 1220 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC027612.4-201ENST00000605371 583 ntBASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CRNKL1Q9BZJ0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms