Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 MIR769-201ENST00000390225 118 ntBASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 AL133499.1-201ENST00000596207 608 ntBASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 AL451050.2-201ENST00000606967 682 ntBASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 KRT8P37-201ENST00000451609 1420 ntBASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL25A1Q9BXS0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
COL25A1Q9BXS0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AC010234.1-201ENST00000494599 870 ntBASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 AC135983.4-201ENST00000564116 1262 ntBASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 MIR6069-201ENST00000620069 79 ntBASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COL25A1Q9BXS0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 AC098859.1-201ENST00000502915 1238 ntBASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.82■□□□□ 0.28
COL25A1Q9BXS0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms