Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 MTND6P24-201ENST00000440466 518 ntBASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 ZNF890P-202ENST00000530367 1156 ntBASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AC105021.1-202ENST00000570572 669 ntBASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AC004840.1-201ENST00000636359 365 ntBASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 AC008764.6-201ENST00000595909 2069 ntBASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CRAMP1Q96RY5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AC124947.2-201ENST00000547118 1133 ntBASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AL132655.2-201ENST00000596276 594 ntBASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AC013467.2-201ENST00000605472 835 ntBASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CRAMP1Q96RY5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 KRT17P7-201ENST00000451704 1104 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 AC007541.1-201ENST00000570282 1469 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 TUBB8P12-201ENST00000308911 1335 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 TUBB7P-202ENST00000428444 1305 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 TUBB8P7-204ENST00000567960 1332 ntBASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRAMP1Q96RY5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms