Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 KRT18P34-201ENST00000488218 1270 ntBASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 AC003101.2-201ENST00000612557 442 ntBASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 AC100757.3-201ENST00000622361 1406 ntBASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3BQ96PB8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AC068880.1-201ENST00000507289 2297 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AC005034.1-201ENST00000426657 489 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AP005018.1-201ENST00000525475 301 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AL138828.2-201ENST00000615812 383 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 SPDYE12P-201ENST00000618416 771 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AC073592.8-201ENST00000624126 511 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 AL133373.2-201ENST00000623187 2828 ntBASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC3BQ96PB8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 SNX33P1-201ENST00000592116 1762 ntBASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC092068.3-201ENST00000587894 2016 ntBASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC005225.4-201ENST00000557330 545 ntBASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC012645.4-201ENST00000610691 1061 ntBASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC3BQ96PB8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms