Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC17Q96LX7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 GPS2P2-201ENST00000430745 888 ntBASIC19.65■□□□□ 0.74
CCDC17Q96LX7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 AC027307.2-201ENST00000591252 911 ntBASIC19.65■□□□□ 0.74
CCDC17Q96LX7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC17Q96LX7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC17Q96LX7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC17Q96LX7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC17Q96LX7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC17Q96LX7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 MIR346-201ENST00000362234 95 ntBASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UXT-AS1-201ENST00000590504 1525 ntBASIC19.64■□□□□ 0.73
CCDC17Q96LX7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC17Q96LX7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AC092068.3-201ENST00000587894 2016 ntBASIC19.63■□□□□ 0.73
CCDC17Q96LX7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.63■□□□□ 0.73
CCDC17Q96LX7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 KRT18P34-201ENST00000488218 1270 ntBASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AC067863.1-201ENST00000494933 530 ntBASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC17Q96LX7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms