Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAX2Q96IS3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAX2Q96IS3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAX2Q96IS3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
RAX2Q96IS3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 IGLL3P-201ENST00000412472 434 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 AC112482.1-201ENST00000492080 688 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MTDHP5-201ENST00000598980 586 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 AL691403.2-201ENST00000618460 490 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 AC055717.3-201ENST00000622967 595 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 LYSMD4-203ENST00000378904 2122 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 C8orf49-201ENST00000525043 1968 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 GNAS-203ENST00000306120 1878 ntBASIC13.25□□□□□ -0.29
RAX2Q96IS3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RAX2Q96IS3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAX2Q96IS3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AC002310.6-201ENST00000624451 1377 ntBASIC13.24□□□□□ -0.29
RAX2Q96IS3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAX2Q96IS3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 AC092865.6-201ENST00000642101 219 ntBASIC13.24□□□□□ -0.29
RAX2Q96IS3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAX2Q96IS3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms