Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 KRT19P2-202ENST00000557173 1012 ntBASIC16.39■□□□□ 0.21
RNF31Q96EP0 SNHG9-202ENST00000564014 471 ntBASIC16.39■□□□□ 0.21
RNF31Q96EP0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 AL355385.1-201ENST00000606123 409 ntBASIC16.39■□□□□ 0.21
RNF31Q96EP0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF31Q96EP0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 AL590787.1-201ENST00000568856 1315 ntBASIC16.39■□□□□ 0.21
RNF31Q96EP0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF31Q96EP0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 MCCD1P2-201ENST00000423228 335 ntBASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AL031432.2-201ENST00000566714 459 ntBASIC16.38■□□□□ 0.21
RNF31Q96EP0 AL928711.1-201ENST00000570165 459 ntBASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 AC002310.6-201ENST00000624451 1377 ntBASIC16.38■□□□□ 0.21
RNF31Q96EP0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF31Q96EP0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RNF31Q96EP0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 FAM58CP-201ENST00000435741 640 ntBASIC16.37■□□□□ 0.21
RNF31Q96EP0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 AC010654.1-201ENST00000615722 808 ntBASIC16.37■□□□□ 0.21
RNF31Q96EP0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 KRT18P28-201ENST00000453838 1332 ntBASIC16.37■□□□□ 0.21
RNF31Q96EP0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF31Q96EP0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF31Q96EP0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF31Q96EP0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF31Q96EP0 LYSMD4-203ENST00000378904 2122 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms