Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC064836.3-201ENST00000607928 673 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AP001350.2-201ENST00000625104 1094 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AC010507.1-201ENST00000633895 436 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 KRT8P39-201ENST00000396270 1433 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 AC012569.1-201ENST00000591191 1524 ntBASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 AL671883.3-201ENST00000603274 991 ntBASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 AL645728.2-201ENST00000641974 660 ntBASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTHRC1Q96CG8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
CTHRC1Q96CG8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AC092171.3-201ENST00000610122 2651 ntBASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 KRT18P2-201ENST00000447938 1258 ntBASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AL513480.1-201ENST00000451731 511 ntBASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.64■□□□□ 0.09
CTHRC1Q96CG8 AL512652.2-201ENST00000625156 1716 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms