Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 AC018712.1-201ENST00000455767 687 ntBASIC16.3■□□□□ 0.2
UBE2E3Q969T4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 RPS15P9-201ENST00000494093 319 ntBASIC16.3■□□□□ 0.2
UBE2E3Q969T4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 KRT126P-201ENST00000549467 1181 ntBASIC16.3■□□□□ 0.2
UBE2E3Q969T4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.3■□□□□ 0.2
UBE2E3Q969T4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 AC087163.2-201ENST00000457299 853 ntBASIC16.29■□□□□ 0.2
UBE2E3Q969T4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 TP73-AS1-207ENST00000624167 988 ntBASIC16.29■□□□□ 0.2
UBE2E3Q969T4 AC005593.1-201ENST00000624894 515 ntBASIC16.29■□□□□ 0.2
UBE2E3Q969T4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE2E3Q969T4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC073621.1-201ENST00000392730 636 ntBASIC16.28■□□□□ 0.2
UBE2E3Q969T4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC013467.2-201ENST00000605472 835 ntBASIC16.28■□□□□ 0.2
UBE2E3Q969T4 AC008667.4-201ENST00000607370 168 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms